Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXC2Q99958 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.7■□□□□ 0.26
FOXC2Q99958 AC093458.2-201ENST00000623150 629 ntBASIC16.7■□□□□ 0.26
FOXC2Q99958 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXC2Q99958 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
FOXC2Q99958 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
FOXC2Q99958 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXC2Q99958 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FOXC2Q99958 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FOXC2Q99958 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXC2Q99958 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 HCG4P8-203ENST00000443049 980 ntBASIC16.69■□□□□ 0.26
FOXC2Q99958 CCR12P-201ENST00000446203 998 ntBASIC16.69■□□□□ 0.26
FOXC2Q99958 AC011506.1-201ENST00000474329 610 ntBASIC16.69■□□□□ 0.26
FOXC2Q99958 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXC2Q99958 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.69■□□□□ 0.26
FOXC2Q99958 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXC2Q99958 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXC2Q99958 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXC2Q99958 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXC2Q99958 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 AC080038.3-201ENST00000623346 1952 ntBASIC16.69■□□□□ 0.26
FOXC2Q99958 LINC00565-201ENST00000562710 2331 ntBASIC16.69■□□□□ 0.26
FOXC2Q99958 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 KRT8P36-201ENST00000489121 1440 ntBASIC16.69■□□□□ 0.26
FOXC2Q99958 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXC2Q99958 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FOXC2Q99958 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
FOXC2Q99958 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXC2Q99958 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXC2Q99958 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
FOXC2Q99958 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 HOMER2P1-201ENST00000455653 964 ntBASIC16.68■□□□□ 0.26
FOXC2Q99958 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.68■□□□□ 0.26
FOXC2Q99958 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXC2Q99958 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXC2Q99958 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.68■□□□□ 0.26
FOXC2Q99958 AC131212.4-201ENST00000623606 975 ntBASIC16.68■□□□□ 0.26
FOXC2Q99958 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXC2Q99958 AL031432.5-201ENST00000641059 760 ntBASIC16.68■□□□□ 0.26
FOXC2Q99958 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
FOXC2Q99958 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
FOXC2Q99958 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXC2Q99958 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
FOXC2Q99958 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FOXC2Q99958 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXC2Q99958 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.67■□□□□ 0.26
FOXC2Q99958 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FOXC2Q99958 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
FOXC2Q99958 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.67■□□□□ 0.26
FOXC2Q99958 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
FOXC2Q99958 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXC2Q99958 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXC2Q99958 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXC2Q99958 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
FOXC2Q99958 SLC25A1P4-201ENST00000567977 778 ntBASIC16.67■□□□□ 0.26
FOXC2Q99958 CLEC4GP1-201ENST00000596555 870 ntBASIC16.67■□□□□ 0.26
FOXC2Q99958 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXC2Q99958 AC010653.2-201ENST00000623505 997 ntBASIC16.67■□□□□ 0.26
FOXC2Q99958 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXC2Q99958 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms