Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 AL354811.1-201ENST00000610286 706 ntBASIC16.03■□□□□ 0.16
RAB40CQ96S21 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.02■□□□□ 0.16
RAB40CQ96S21 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 AC091799.1-201ENST00000422823 811 ntBASIC16.02■□□□□ 0.16
RAB40CQ96S21 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40CQ96S21 AC243732.1-201ENST00000612648 864 ntBASIC16.02■□□□□ 0.16
RAB40CQ96S21 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAB40CQ96S21 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RAB40CQ96S21 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 NEFHP1-201ENST00000412845 2629 ntBASIC16.02■□□□□ 0.15
RAB40CQ96S21 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
RAB40CQ96S21 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RAB40CQ96S21 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.02■□□□□ 0.15
RAB40CQ96S21 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40CQ96S21 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 AC105265.2-201ENST00000467189 838 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 DUX4L2-201ENST00000561772 1275 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 DUX4L6-201ENST00000626483 1275 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 DUX4L1-201ENST00000627662 1275 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 DUX4L8-201ENST00000629013 1275 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 DUX4L3-201ENST00000630187 1275 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 DUX4L7-201ENST00000630678 1275 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 DUX4L5-201ENST00000630834 1275 ntBASIC16.01■□□□□ 0.15
RAB40CQ96S21 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB40CQ96S21 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40CQ96S21 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms