Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 KRT17P3-201ENST00000420566 1262 ntBASIC16.48■□□□□ 0.23
GAFA1Q96PS6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 POU5F1P3-201ENST00000428824 1078 ntBASIC16.48■□□□□ 0.23
GAFA1Q96PS6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 AC069544.1-201ENST00000609399 999 ntBASIC16.48■□□□□ 0.23
GAFA1Q96PS6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GAFA1Q96PS6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 TFP1-202ENST00000475455 1573 ntBASIC16.47■□□□□ 0.23
GAFA1Q96PS6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 TSPY20P-201ENST00000450910 630 ntBASIC16.47■□□□□ 0.23
GAFA1Q96PS6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 AC233263.1-201ENST00000578059 224 ntBASIC16.47■□□□□ 0.23
GAFA1Q96PS6 AC006058.3-201ENST00000606217 1069 ntBASIC16.47■□□□□ 0.23
GAFA1Q96PS6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 AL121829.2-201ENST00000620908 328 ntBASIC16.47■□□□□ 0.23
GAFA1Q96PS6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.47■□□□□ 0.23
GAFA1Q96PS6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.46■□□□□ 0.23
GAFA1Q96PS6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms