Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHDQ96IW2 TFP1-202ENST00000475455 1573 ntBASIC20.07■□□□□ 0.8
SHDQ96IW2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHDQ96IW2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SHDQ96IW2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SHDQ96IW2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.06■□□□□ 0.8
SHDQ96IW2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHDQ96IW2 GUSBP5-202ENST00000510805 1989 ntBASIC20.06■□□□□ 0.8
SHDQ96IW2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SHDQ96IW2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHDQ96IW2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHDQ96IW2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.06■□□□□ 0.8
SHDQ96IW2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHDQ96IW2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.06■□□□□ 0.8
SHDQ96IW2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SHDQ96IW2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHDQ96IW2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHDQ96IW2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.06■□□□□ 0.8
SHDQ96IW2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
SHDQ96IW2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.06■□□□□ 0.8
SHDQ96IW2 KRT16P6-202ENST00000425692 1426 ntBASIC20.06■□□□□ 0.8
SHDQ96IW2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.06■□□□□ 0.8
SHDQ96IW2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.06■□□□□ 0.8
SHDQ96IW2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.06■□□□□ 0.8
SHDQ96IW2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.06■□□□□ 0.8
SHDQ96IW2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.06■□□□□ 0.8
SHDQ96IW2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.06■□□□□ 0.8
SHDQ96IW2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHDQ96IW2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHDQ96IW2 AC096733.2-201ENST00000609937 1394 ntBASIC20.06■□□□□ 0.8
SHDQ96IW2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 AC244015.2-201ENST00000616358 1861 ntBASIC20.05■□□□□ 0.8
SHDQ96IW2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
SHDQ96IW2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SHDQ96IW2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.05■□□□□ 0.8
SHDQ96IW2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.05■□□□□ 0.8
SHDQ96IW2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.05■□□□□ 0.8
SHDQ96IW2 PCED1CP-201ENST00000419887 785 ntBASIC20.05■□□□□ 0.8
SHDQ96IW2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.05■□□□□ 0.8
SHDQ96IW2 HOMER2P1-201ENST00000455653 964 ntBASIC20.05■□□□□ 0.8
SHDQ96IW2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SHDQ96IW2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.05■□□□□ 0.8
SHDQ96IW2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.05■□□□□ 0.8
SHDQ96IW2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
SHDQ96IW2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.05■□□□□ 0.8
SHDQ96IW2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.05■□□□□ 0.8
SHDQ96IW2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHDQ96IW2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHDQ96IW2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.04■□□□□ 0.8
SHDQ96IW2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHDQ96IW2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
SHDQ96IW2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.04■□□□□ 0.8
SHDQ96IW2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHDQ96IW2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHDQ96IW2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.04■□□□□ 0.8
SHDQ96IW2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHDQ96IW2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.04■□□□□ 0.8
SHDQ96IW2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.04■□□□□ 0.8
SHDQ96IW2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.04■□□□□ 0.8
SHDQ96IW2 AC141257.4-201ENST00000634557 245 ntBASIC20.04■□□□□ 0.8
SHDQ96IW2 AC136944.6-201ENST00000634818 245 ntBASIC20.04■□□□□ 0.8
SHDQ96IW2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.04■□□□□ 0.8
SHDQ96IW2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHDQ96IW2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHDQ96IW2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.03■□□□□ 0.8
SHDQ96IW2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SHDQ96IW2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.03■□□□□ 0.8
SHDQ96IW2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.03■□□□□ 0.8
SHDQ96IW2 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.03■□□□□ 0.8
SHDQ96IW2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.03■□□□□ 0.8
SHDQ96IW2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.03■□□□□ 0.8
SHDQ96IW2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.03■□□□□ 0.8
SHDQ96IW2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 AC007663.1-201ENST00000438948 1240 ntBASIC20.03■□□□□ 0.8
SHDQ96IW2 TSPY17P-201ENST00000450329 467 ntBASIC20.03■□□□□ 0.8
SHDQ96IW2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.03■□□□□ 0.8
SHDQ96IW2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SHDQ96IW2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.03■□□□□ 0.8
SHDQ96IW2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.03■□□□□ 0.8
SHDQ96IW2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SHDQ96IW2 AL121894.2-201ENST00000602977 491 ntBASIC20.03■□□□□ 0.8
SHDQ96IW2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.03■□□□□ 0.8
SHDQ96IW2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.03■□□□□ 0.8
SHDQ96IW2 IER3-202ENST00000376377 1350 ntBASIC20.03■□□□□ 0.8
SHDQ96IW2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms