Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMD4Q96H15 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TIMD4Q96H15 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TIMD4Q96H15 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
TIMD4Q96H15 RARRES2P10-201ENST00000564312 460 ntBASIC16.65■□□□□ 0.26
TIMD4Q96H15 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TIMD4Q96H15 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMD4Q96H15 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMD4Q96H15 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TIMD4Q96H15 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
TIMD4Q96H15 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 AL353807.1-201ENST00000427475 662 ntBASIC16.64■□□□□ 0.25
TIMD4Q96H15 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 KRT16P5-201ENST00000455284 522 ntBASIC16.64■□□□□ 0.25
TIMD4Q96H15 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMD4Q96H15 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMD4Q96H15 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TIMD4Q96H15 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMD4Q96H15 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMD4Q96H15 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMD4Q96H15 AC007375.3-201ENST00000600936 2314 ntBASIC16.62■□□□□ 0.25
TIMD4Q96H15 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMD4Q96H15 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMD4Q96H15 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 RPS2P55-201ENST00000397318 883 ntBASIC16.62■□□□□ 0.25
TIMD4Q96H15 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMD4Q96H15 AC107956.1-201ENST00000494359 873 ntBASIC16.62■□□□□ 0.25
TIMD4Q96H15 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMD4Q96H15 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 AC233702.5-201ENST00000584107 538 ntBASIC16.62■□□□□ 0.25
TIMD4Q96H15 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.62■□□□□ 0.25
TIMD4Q96H15 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMD4Q96H15 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMD4Q96H15 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMD4Q96H15 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 AP006587.1-201ENST00000534129 1502 ntBASIC16.61■□□□□ 0.25
TIMD4Q96H15 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 Z99916.2-201ENST00000604037 246 ntBASIC16.61■□□□□ 0.25
TIMD4Q96H15 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms