Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 RPPH1-201ENST00000516869 333 ntBASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 C1QBPP2-201ENST00000528754 825 ntBASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 AC006557.6-201ENST00000623071 864 ntBASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SH3KBP1Q96B97 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SH3KBP1Q96B97 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.58■□□□□ 0.73
SH3KBP1Q96B97 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SH3KBP1Q96B97 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SH3KBP1Q96B97 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.58■□□□□ 0.73
SH3KBP1Q96B97 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SH3KBP1Q96B97 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SH3KBP1Q96B97 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SH3KBP1Q96B97 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.58■□□□□ 0.72
SH3KBP1Q96B97 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3KBP1Q96B97 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 AC020907.5-201ENST00000624372 1936 ntBASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3KBP1Q96B97 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms