Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ZNF428Q96B54 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ZNF428Q96B54 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
ZNF428Q96B54 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZNF428Q96B54 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ZNF428Q96B54 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZNF428Q96B54 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ZNF428Q96B54 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZNF428Q96B54 SNORA78-201ENST00000459373 127 ntBASIC25.5■■□□□ 1.67
ZNF428Q96B54 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZNF428Q96B54 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZNF428Q96B54 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZNF428Q96B54 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.5■■□□□ 1.67
ZNF428Q96B54 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 AC112907.3-201ENST00000577781 2400 ntBASIC25.49■■□□□ 1.67
ZNF428Q96B54 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.49■■□□□ 1.67
ZNF428Q96B54 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF428Q96B54 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZNF428Q96B54 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZNF428Q96B54 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZNF428Q96B54 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ZNF428Q96B54 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
ZNF428Q96B54 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.48■■□□□ 1.67
ZNF428Q96B54 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.48■■□□□ 1.67
ZNF428Q96B54 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.48■■□□□ 1.67
ZNF428Q96B54 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZNF428Q96B54 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZNF428Q96B54 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.48■■□□□ 1.67
ZNF428Q96B54 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.48■■□□□ 1.67
ZNF428Q96B54 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.48■■□□□ 1.67
ZNF428Q96B54 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
ZNF428Q96B54 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC25.47■■□□□ 1.67
ZNF428Q96B54 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 KRASP1-201ENST00000407852 552 ntBASIC25.47■■□□□ 1.67
ZNF428Q96B54 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.47■■□□□ 1.67
ZNF428Q96B54 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.47■■□□□ 1.67
ZNF428Q96B54 LBX2-AS1-202ENST00000603175 2083 ntBASIC25.47■■□□□ 1.67
ZNF428Q96B54 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.47■■□□□ 1.67
ZNF428Q96B54 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZNF428Q96B54 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.46■■□□□ 1.67
ZNF428Q96B54 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.46■■□□□ 1.67
ZNF428Q96B54 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.46■■□□□ 1.67
ZNF428Q96B54 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.46■■□□□ 1.67
ZNF428Q96B54 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
ZNF428Q96B54 AC124016.1-201ENST00000609552 612 ntBASIC25.46■■□□□ 1.67
ZNF428Q96B54 AL121829.2-201ENST00000620908 328 ntBASIC25.46■■□□□ 1.67
ZNF428Q96B54 TFP1-202ENST00000475455 1573 ntBASIC25.46■■□□□ 1.67
ZNF428Q96B54 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.46■■□□□ 1.67
ZNF428Q96B54 AC018553.1-201ENST00000616682 1458 ntBASIC25.46■■□□□ 1.67
ZNF428Q96B54 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZNF428Q96B54 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.46■■□□□ 1.67
ZNF428Q96B54 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
ZNF428Q96B54 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
ZNF428Q96B54 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
ZNF428Q96B54 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
ZNF428Q96B54 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms