Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTP4A1Q93096 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTP4A1Q93096 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTP4A1Q93096 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTP4A1Q93096 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTP4A1Q93096 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PTP4A1Q93096 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.77■□□□□ 0.44
PTP4A1Q93096 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTP4A1Q93096 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.77■□□□□ 0.44
PTP4A1Q93096 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.77■□□□□ 0.44
PTP4A1Q93096 RARRES2P4-201ENST00000514074 484 ntBASIC17.77■□□□□ 0.44
PTP4A1Q93096 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.77■□□□□ 0.44
PTP4A1Q93096 DUX4L16-201ENST00000555130 1264 ntBASIC17.77■□□□□ 0.44
PTP4A1Q93096 KRT16P6-202ENST00000425692 1426 ntBASIC17.77■□□□□ 0.44
PTP4A1Q93096 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTP4A1Q93096 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTP4A1Q93096 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTP4A1Q93096 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.77■□□□□ 0.43
PTP4A1Q93096 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTP4A1Q93096 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTP4A1Q93096 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTP4A1Q93096 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.77■□□□□ 0.43
PTP4A1Q93096 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.77■□□□□ 0.43
PTP4A1Q93096 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.77■□□□□ 0.43
PTP4A1Q93096 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTP4A1Q93096 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.77■□□□□ 0.43
PTP4A1Q93096 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTP4A1Q93096 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTP4A1Q93096 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTP4A1Q93096 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 KRT8P20-201ENST00000423953 1409 ntBASIC17.76■□□□□ 0.43
PTP4A1Q93096 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.76■□□□□ 0.43
PTP4A1Q93096 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 AL031963.3-201ENST00000606441 850 ntBASIC17.76■□□□□ 0.43
PTP4A1Q93096 AC231657.2-201ENST00000624556 255 ntBASIC17.76■□□□□ 0.43
PTP4A1Q93096 AC092437.1-201ENST00000624794 1048 ntBASIC17.76■□□□□ 0.43
PTP4A1Q93096 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTP4A1Q93096 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.76■□□□□ 0.43
PTP4A1Q93096 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 AC004911.1-201ENST00000416316 871 ntBASIC17.75■□□□□ 0.43
PTP4A1Q93096 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PTP4A1Q93096 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTP4A1Q93096 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PTP4A1Q93096 AC068338.2-201ENST00000563278 1430 ntBASIC17.74■□□□□ 0.43
PTP4A1Q93096 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PTP4A1Q93096 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.74■□□□□ 0.43
PTP4A1Q93096 KRT18P68-201ENST00000392293 1000 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms