Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 AL031133.1-201ENST00000406807 723 ntBASIC25.43■■□□□ 1.66
SMARCC1Q92922 AC004951.3-201ENST00000418645 1148 ntBASIC25.43■■□□□ 1.66
SMARCC1Q92922 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.43■■□□□ 1.66
SMARCC1Q92922 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC1Q92922 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.42■■□□□ 1.66
SMARCC1Q92922 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC1Q92922 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.42■■□□□ 1.66
SMARCC1Q92922 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC1Q92922 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC1Q92922 SLC25A1P2-201ENST00000430693 912 ntBASIC25.42■■□□□ 1.66
SMARCC1Q92922 MFAP1P1-201ENST00000442257 1255 ntBASIC25.42■■□□□ 1.66
SMARCC1Q92922 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC1Q92922 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.42■■□□□ 1.66
SMARCC1Q92922 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC1Q92922 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
SMARCC1Q92922 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC1Q92922 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
SMARCC1Q92922 AC005229.4-201ENST00000610085 2198 ntBASIC25.41■■□□□ 1.66
SMARCC1Q92922 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMARCC1Q92922 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.41■■□□□ 1.66
SMARCC1Q92922 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.41■■□□□ 1.66
SMARCC1Q92922 AC008040.2-201ENST00000461049 708 ntBASIC25.41■■□□□ 1.66
SMARCC1Q92922 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.41■■□□□ 1.66
SMARCC1Q92922 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.41■■□□□ 1.66
SMARCC1Q92922 AC010653.2-201ENST00000623505 997 ntBASIC25.41■■□□□ 1.66
SMARCC1Q92922 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.41■■□□□ 1.66
SMARCC1Q92922 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SMARCC1Q92922 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SMARCC1Q92922 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 TSPY5P-201ENST00000426936 936 ntBASIC25.4■■□□□ 1.66
SMARCC1Q92922 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 YBX1P2-201ENST00000489612 999 ntBASIC25.4■■□□□ 1.66
SMARCC1Q92922 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 HLA-A-209ENST00000638375 975 ntBASIC25.4■■□□□ 1.66
SMARCC1Q92922 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC1Q92922 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
SMARCC1Q92922 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC1Q92922 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC1Q92922 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC1Q92922 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.39■■□□□ 1.66
SMARCC1Q92922 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC1Q92922 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC1Q92922 FAM207BP-201ENST00000447172 505 ntBASIC25.39■■□□□ 1.66
SMARCC1Q92922 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.39■■□□□ 1.66
SMARCC1Q92922 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC1Q92922 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.39■■□□□ 1.66
SMARCC1Q92922 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.39■■□□□ 1.66
SMARCC1Q92922 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
SMARCC1Q92922 DPP3P2-201ENST00000416030 1696 ntBASIC25.39■■□□□ 1.65
SMARCC1Q92922 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SMARCC1Q92922 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMARCC1Q92922 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMARCC1Q92922 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMARCC1Q92922 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.39■■□□□ 1.65
SMARCC1Q92922 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC1Q92922 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC1Q92922 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC1Q92922 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC1Q92922 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC1Q92922 COX11P1-201ENST00000489116 835 ntBASIC25.38■■□□□ 1.65
SMARCC1Q92922 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms