Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.06■□□□□ 0.48
SGCDQ92629 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.06■□□□□ 0.48
SGCDQ92629 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.06■□□□□ 0.48
SGCDQ92629 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SGCDQ92629 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 AL390961.4-201ENST00000623958 2535 ntBASIC18.06■□□□□ 0.48
SGCDQ92629 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.06■□□□□ 0.48
SGCDQ92629 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.06■□□□□ 0.48
SGCDQ92629 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SGCDQ92629 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.05■□□□□ 0.48
SGCDQ92629 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
SGCDQ92629 AC116050.2-201ENST00000612102 1779 ntBASIC18.05■□□□□ 0.48
SGCDQ92629 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.05■□□□□ 0.48
SGCDQ92629 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SGCDQ92629 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SGCDQ92629 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.05■□□□□ 0.48
SGCDQ92629 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
SGCDQ92629 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCDQ92629 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SGCDQ92629 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCDQ92629 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGCDQ92629 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCDQ92629 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SGCDQ92629 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.04■□□□□ 0.48
SGCDQ92629 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCDQ92629 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCDQ92629 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGCDQ92629 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.04■□□□□ 0.48
SGCDQ92629 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SGCDQ92629 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.04■□□□□ 0.48
SGCDQ92629 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGCDQ92629 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.04■□□□□ 0.48
SGCDQ92629 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCDQ92629 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCDQ92629 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.03■□□□□ 0.48
SGCDQ92629 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.03■□□□□ 0.48
SGCDQ92629 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.03■□□□□ 0.48
SGCDQ92629 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.03■□□□□ 0.48
SGCDQ92629 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.03■□□□□ 0.48
SGCDQ92629 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 DUX4L19-201ENST00000557448 1267 ntBASIC18.03■□□□□ 0.48
SGCDQ92629 MIR4466-201ENST00000606121 54 ntBASIC18.03■□□□□ 0.48
SGCDQ92629 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SGCDQ92629 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SGCDQ92629 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SGCDQ92629 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGCDQ92629 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGCDQ92629 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
SGCDQ92629 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGCDQ92629 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGCDQ92629 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGCDQ92629 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SGCDQ92629 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.02■□□□□ 0.48
SGCDQ92629 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms