Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX1Q92499 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX1Q92499 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX1Q92499 AC006058.3-201ENST00000606217 1069 ntBASIC21.11■□□□□ 0.97
DDX1Q92499 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX1Q92499 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX1Q92499 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX1Q92499 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DDX1Q92499 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX1Q92499 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX1Q92499 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DDX1Q92499 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX1Q92499 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX1Q92499 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX1Q92499 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX1Q92499 AC083880.1-201ENST00000608266 535 ntBASIC21.1■□□□□ 0.97
DDX1Q92499 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
DDX1Q92499 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX1Q92499 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX1Q92499 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX1Q92499 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DDX1Q92499 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX1Q92499 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX1Q92499 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX1Q92499 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX1Q92499 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX1Q92499 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX1Q92499 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.09■□□□□ 0.97
DDX1Q92499 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX1Q92499 AC128676.1-201ENST00000454392 318 ntBASIC21.09■□□□□ 0.97
DDX1Q92499 AC097658.1-201ENST00000475555 843 ntBASIC21.09■□□□□ 0.97
DDX1Q92499 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX1Q92499 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX1Q92499 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX1Q92499 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX1Q92499 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX1Q92499 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX1Q92499 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
DDX1Q92499 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX1Q92499 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX1Q92499 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX1Q92499 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX1Q92499 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX1Q92499 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX1Q92499 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
DDX1Q92499 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX1Q92499 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX1Q92499 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX1Q92499 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
DDX1Q92499 MIR718-201ENST00000390190 70 ntBASIC21.08■□□□□ 0.97
DDX1Q92499 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX1Q92499 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX1Q92499 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX1Q92499 AC008550.1-201ENST00000511500 884 ntBASIC21.08■□□□□ 0.97
DDX1Q92499 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX1Q92499 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX1Q92499 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX1Q92499 AC073912.3-201ENST00000624414 853 ntBASIC21.08■□□□□ 0.97
DDX1Q92499 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.08■□□□□ 0.96
DDX1Q92499 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX1Q92499 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.08■□□□□ 0.96
DDX1Q92499 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
DDX1Q92499 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX1Q92499 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
DDX1Q92499 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DDX1Q92499 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX1Q92499 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DDX1Q92499 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX1Q92499 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX1Q92499 UBE2SP1-201ENST00000450587 669 ntBASIC21.07■□□□□ 0.96
DDX1Q92499 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
DDX1Q92499 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX1Q92499 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX1Q92499 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX1Q92499 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX1Q92499 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DDX1Q92499 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DDX1Q92499 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX1Q92499 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms