Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 AC006058.3-201ENST00000606217 1069 ntBASIC20.99■□□□□ 0.95
UBA3Q8TBC4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 FAM201B-201ENST00000458407 597 ntBASIC20.98■□□□□ 0.95
UBA3Q8TBC4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 AC018553.1-201ENST00000616682 1458 ntBASIC20.98■□□□□ 0.95
UBA3Q8TBC4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBA3Q8TBC4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 KRT17P3-201ENST00000420566 1262 ntBASIC20.97■□□□□ 0.95
UBA3Q8TBC4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 AFG3L1P-217ENST00000557444 2447 ntBASIC20.97■□□□□ 0.95
UBA3Q8TBC4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.97■□□□□ 0.95
UBA3Q8TBC4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBA3Q8TBC4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
UBA3Q8TBC4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 AC128676.1-201ENST00000454392 318 ntBASIC20.95■□□□□ 0.94
UBA3Q8TBC4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 AC073648.6-201ENST00000641589 218 ntBASIC20.95■□□□□ 0.94
UBA3Q8TBC4 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.95■□□□□ 0.94
UBA3Q8TBC4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
UBA3Q8TBC4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.94■□□□□ 0.94
UBA3Q8TBC4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBA3Q8TBC4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBA3Q8TBC4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
UBA3Q8TBC4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBA3Q8TBC4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.94■□□□□ 0.94
UBA3Q8TBC4 AC116351.2-201ENST00000606540 1585 ntBASIC20.94■□□□□ 0.94
UBA3Q8TBC4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms