Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.47■■□□□ 1.51
RTL9Q8NET4 MIR6786-201ENST00000616843 113 ntBASIC24.47■■□□□ 1.51
RTL9Q8NET4 CR392000.1-201ENST00000624770 1228 ntBASIC24.47■■□□□ 1.51
RTL9Q8NET4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC24.47■■□□□ 1.51
RTL9Q8NET4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.47■■□□□ 1.51
RTL9Q8NET4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTL9Q8NET4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTL9Q8NET4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTL9Q8NET4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTL9Q8NET4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.46■■□□□ 1.51
RTL9Q8NET4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.46■■□□□ 1.51
RTL9Q8NET4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.46■■□□□ 1.51
RTL9Q8NET4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.46■■□□□ 1.51
RTL9Q8NET4 AP000525.1-201ENST00000608286 694 ntBASIC24.46■■□□□ 1.51
RTL9Q8NET4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
RTL9Q8NET4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTL9Q8NET4 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.46■■□□□ 1.51
RTL9Q8NET4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTL9Q8NET4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
RTL9Q8NET4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RTL9Q8NET4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.45■■□□□ 1.5
RTL9Q8NET4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTL9Q8NET4 MESTP1-201ENST00000404287 994 ntBASIC24.45■■□□□ 1.5
RTL9Q8NET4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.45■■□□□ 1.5
RTL9Q8NET4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTL9Q8NET4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.45■■□□□ 1.5
RTL9Q8NET4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.45■■□□□ 1.5
RTL9Q8NET4 AC145285.6-201ENST00000604632 637 ntBASIC24.45■■□□□ 1.5
RTL9Q8NET4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.45■■□□□ 1.5
RTL9Q8NET4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTL9Q8NET4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.44■■□□□ 1.5
RTL9Q8NET4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.44■■□□□ 1.5
RTL9Q8NET4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.44■■□□□ 1.5
RTL9Q8NET4 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.44■■□□□ 1.5
RTL9Q8NET4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RTL9Q8NET4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.44■■□□□ 1.5
RTL9Q8NET4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RTL9Q8NET4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.44■■□□□ 1.5
RTL9Q8NET4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTL9Q8NET4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTL9Q8NET4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.43■■□□□ 1.5
RTL9Q8NET4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.43■■□□□ 1.5
RTL9Q8NET4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.43■■□□□ 1.5
RTL9Q8NET4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTL9Q8NET4 FITM1-202ENST00000559294 800 ntBASIC24.43■■□□□ 1.5
RTL9Q8NET4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.43■■□□□ 1.5
RTL9Q8NET4 AL031985.4-201ENST00000642138 673 ntBASIC24.43■■□□□ 1.5
RTL9Q8NET4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTL9Q8NET4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RTL9Q8NET4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTL9Q8NET4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.43■■□□□ 1.5
RTL9Q8NET4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTL9Q8NET4 SMG8-203ENST00000578922 2178 ntBASIC24.43■■□□□ 1.5
RTL9Q8NET4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RTL9Q8NET4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.43■■□□□ 1.5
RTL9Q8NET4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTL9Q8NET4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTL9Q8NET4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTL9Q8NET4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RTL9Q8NET4 TUBB8P6-201ENST00000436895 1288 ntBASIC24.42■■□□□ 1.5
RTL9Q8NET4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RTL9Q8NET4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RTL9Q8NET4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTL9Q8NET4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RTL9Q8NET4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTL9Q8NET4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.42■■□□□ 1.5
RTL9Q8NET4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTL9Q8NET4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RTL9Q8NET4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTL9Q8NET4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTL9Q8NET4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTL9Q8NET4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTL9Q8NET4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTL9Q8NET4 AC004980.1-204ENST00000429707 299 ntBASIC24.41■■□□□ 1.5
RTL9Q8NET4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.41■■□□□ 1.5
RTL9Q8NET4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms