Protein–RNA interactions for Protein: Q8N6F1

CLDN19, Claudin-19, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19Q8N6F1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 MIR4651-201ENST00000582622 73 ntBASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 AC008687.6-201ENST00000596318 630 ntBASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 AC120498.8-201ENST00000614275 531 ntBASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN19Q8N6F1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN19Q8N6F1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN19Q8N6F1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CLDN19Q8N6F1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN19Q8N6F1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN19Q8N6F1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 AP003097.1-201ENST00000530657 1135 ntBASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 AC125437.2-201ENST00000625180 2167 ntBASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN19Q8N6F1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 AC018553.1-201ENST00000616682 1458 ntBASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN19Q8N6F1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
CLDN19Q8N6F1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLDN19Q8N6F1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN19Q8N6F1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN19Q8N6F1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN19Q8N6F1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN19Q8N6F1 ESRRAP1-201ENST00000400596 1257 ntBASIC19.56■□□□□ 0.72
CLDN19Q8N6F1 AC026366.1-201ENST00000488803 879 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms