Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF7Q8N684 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF7Q8N684 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF7Q8N684 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 AC010536.3-201ENST00000620306 533 ntBASIC19.32■□□□□ 0.68
CPSF7Q8N684 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF7Q8N684 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF7Q8N684 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF7Q8N684 AC009237.14-201ENST00000609975 1594 ntBASIC19.32■□□□□ 0.68
CPSF7Q8N684 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.31■□□□□ 0.68
CPSF7Q8N684 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.31■□□□□ 0.68
CPSF7Q8N684 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CPSF7Q8N684 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPSF7Q8N684 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 AC093503.3-201ENST00000624917 2352 ntBASIC19.31■□□□□ 0.68
CPSF7Q8N684 AC007322.3-201ENST00000426526 701 ntBASIC19.31■□□□□ 0.68
CPSF7Q8N684 FAM21FP-204ENST00000608637 956 ntBASIC19.31■□□□□ 0.68
CPSF7Q8N684 AL121832.2-201ENST00000610979 668 ntBASIC19.31■□□□□ 0.68
CPSF7Q8N684 AC243732.1-201ENST00000612648 864 ntBASIC19.31■□□□□ 0.68
CPSF7Q8N684 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.31■□□□□ 0.68
CPSF7Q8N684 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CPSF7Q8N684 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.31■□□□□ 0.68
CPSF7Q8N684 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPSF7Q8N684 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 CNN2P6-201ENST00000439038 900 ntBASIC19.3■□□□□ 0.68
CPSF7Q8N684 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 AC083906.2-201ENST00000511578 360 ntBASIC19.3■□□□□ 0.68
CPSF7Q8N684 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPSF7Q8N684 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.3■□□□□ 0.68
CPSF7Q8N684 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.29■□□□□ 0.68
CPSF7Q8N684 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.29■□□□□ 0.68
CPSF7Q8N684 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.29■□□□□ 0.68
CPSF7Q8N684 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPSF7Q8N684 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
CPSF7Q8N684 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.28■□□□□ 0.68
CPSF7Q8N684 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms