Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 CA15P1-201ENST00000481698 905 ntBASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 GCSHP2-201ENST00000560971 527 ntBASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
LTBP4Q8N2S1 BX119927.1-201ENST00000636596 1552 ntBASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 KRT8P36-201ENST00000489121 1440 ntBASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
LTBP4Q8N2S1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 NEK4P2-201ENST00000580004 1012 ntBASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 PENK-208ENST00000523051 772 ntTSL 5 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 AF228730.7-201ENST00000641842 219 ntBASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
LTBP4Q8N2S1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 HLA-A-209ENST00000638375 975 ntBASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC27.77■■■□□ 2.04
LTBP4Q8N2S1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.04
LTBP4Q8N2S1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC27.76■■■□□ 2.04
LTBP4Q8N2S1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC27.76■■■□□ 2.04
LTBP4Q8N2S1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
LTBP4Q8N2S1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 AP002414.4-201ENST00000589764 1148 ntBASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 AL121672.3-201ENST00000608644 468 ntBASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LTBP4Q8N2S1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 AC092865.5-201ENST00000545435 363 ntBASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTBP4Q8N2S1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms