Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 AL162377.1-201ENST00000618844 1793 ntBASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 AL355472.2-201ENST00000422958 438 ntBASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 AL596275.1-201ENST00000423464 877 ntBASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 EIF2S2P3-201ENST00000428356 999 ntBASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 CDV3P1-201ENST00000471403 739 ntBASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 RNF165-205ENST00000588679 2904 ntBASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
LINC00528Q8N1L1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00528Q8N1L1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 FAM197Y4-202ENST00000622692 608 ntBASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 KRT17P1-201ENST00000399211 1546 ntBASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00528Q8N1L1 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 AC008550.1-201ENST00000511500 884 ntBASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 AC060766.5-201ENST00000590539 871 ntBASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 FAM21FP-204ENST00000608637 956 ntBASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00528Q8N1L1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms