Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ABCA6Q8N139 AL121603.2-201ENST00000557373 2117 ntBASIC29.55■■■□□ 2.32
ABCA6Q8N139 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA6Q8N139 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
ABCA6Q8N139 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA6Q8N139 TUBB8P6-201ENST00000436895 1288 ntBASIC29.54■■■□□ 2.32
ABCA6Q8N139 KRT18P38-201ENST00000449496 1282 ntBASIC29.54■■■□□ 2.32
ABCA6Q8N139 Z85996.1-201ENST00000494644 937 ntBASIC29.54■■■□□ 2.32
ABCA6Q8N139 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC29.54■■■□□ 2.32
ABCA6Q8N139 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC29.54■■■□□ 2.32
ABCA6Q8N139 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA6Q8N139 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA6Q8N139 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC29.54■■■□□ 2.32
ABCA6Q8N139 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA6Q8N139 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA6Q8N139 SLC25A1P2-201ENST00000430693 912 ntBASIC29.53■■■□□ 2.32
ABCA6Q8N139 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 GXYLT1P6-201ENST00000456472 1187 ntBASIC29.53■■■□□ 2.32
ABCA6Q8N139 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 AC012313.10-201ENST00000623509 926 ntBASIC29.53■■■□□ 2.32
ABCA6Q8N139 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 AC233723.2-201ENST00000623798 2106 ntBASIC29.53■■■□□ 2.32
ABCA6Q8N139 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA6Q8N139 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 AL441883.1-201ENST00000566170 1045 ntBASIC29.53■■■□□ 2.32
ABCA6Q8N139 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC29.53■■■□□ 2.32
ABCA6Q8N139 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
ABCA6Q8N139 ECEL1P1-201ENST00000373592 1742 ntBASIC29.52■■■□□ 2.32
ABCA6Q8N139 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 AC018553.1-201ENST00000616682 1458 ntBASIC29.52■■■□□ 2.32
ABCA6Q8N139 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC29.52■■■□□ 2.32
ABCA6Q8N139 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC29.52■■■□□ 2.32
ABCA6Q8N139 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC29.52■■■□□ 2.32
ABCA6Q8N139 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC29.52■■■□□ 2.32
ABCA6Q8N139 AL023973.1-201ENST00000624619 620 ntBASIC29.52■■■□□ 2.32
ABCA6Q8N139 CLN6-214ENST00000636314 442 ntTSL 3 BASIC29.52■■■□□ 2.32
ABCA6Q8N139 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA6Q8N139 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC29.52■■■□□ 2.32
ABCA6Q8N139 AC244015.2-201ENST00000616358 1861 ntBASIC29.52■■■□□ 2.32
ABCA6Q8N139 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
ABCA6Q8N139 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
ABCA6Q8N139 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC29.51■■■□□ 2.31
ABCA6Q8N139 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC29.51■■■□□ 2.31
ABCA6Q8N139 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC29.51■■■□□ 2.31
ABCA6Q8N139 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
ABCA6Q8N139 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ABCA6Q8N139 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
ABCA6Q8N139 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA6Q8N139 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA6Q8N139 AC026396.1-201ENST00000419388 421 ntBASIC29.5■■■□□ 2.31
ABCA6Q8N139 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC29.5■■■□□ 2.31
ABCA6Q8N139 AC011558.1-201ENST00000623459 338 ntBASIC29.5■■■□□ 2.31
ABCA6Q8N139 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC29.5■■■□□ 2.31
ABCA6Q8N139 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA6Q8N139 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
ABCA6Q8N139 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ABCA6Q8N139 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC29.49■■■□□ 2.31
ABCA6Q8N139 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ABCA6Q8N139 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC29.49■■■□□ 2.31
ABCA6Q8N139 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
ABCA6Q8N139 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC29.49■■■□□ 2.31
ABCA6Q8N139 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC29.49■■■□□ 2.31
ABCA6Q8N139 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ABCA6Q8N139 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC29.49■■■□□ 2.31
ABCA6Q8N139 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC29.49■■■□□ 2.31
ABCA6Q8N139 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ABCA6Q8N139 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ABCA6Q8N139 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC29.49■■■□□ 2.31
ABCA6Q8N139 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC29.49■■■□□ 2.31
ABCA6Q8N139 AL023803.3-201ENST00000615559 522 ntBASIC29.49■■■□□ 2.31
ABCA6Q8N139 AC130371.2-201ENST00000619443 611 ntBASIC29.49■■■□□ 2.31
ABCA6Q8N139 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
ABCA6Q8N139 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC29.48■■■□□ 2.31
ABCA6Q8N139 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
ABCA6Q8N139 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms