Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SMC5Q8IY18 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SMC5Q8IY18 BX323043.1-201ENST00000641006 1765 ntBASIC24.53■■□□□ 1.52
SMC5Q8IY18 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.53■■□□□ 1.52
SMC5Q8IY18 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
SMC5Q8IY18 AC005829.2-201ENST00000571422 1056 ntBASIC24.53■■□□□ 1.52
SMC5Q8IY18 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
SMC5Q8IY18 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.53■■□□□ 1.52
SMC5Q8IY18 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC5Q8IY18 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.52■■□□□ 1.52
SMC5Q8IY18 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.52■■□□□ 1.52
SMC5Q8IY18 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
SMC5Q8IY18 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.52■■□□□ 1.52
SMC5Q8IY18 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.52■■□□□ 1.52
SMC5Q8IY18 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.52■■□□□ 1.52
SMC5Q8IY18 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.52■■□□□ 1.52
SMC5Q8IY18 TSPY6P-201ENST00000448518 926 ntBASIC24.52■■□□□ 1.52
SMC5Q8IY18 AC091874.3-201ENST00000512672 1195 ntBASIC24.52■■□□□ 1.52
SMC5Q8IY18 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC5Q8IY18 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.52■■□□□ 1.52
SMC5Q8IY18 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMC5Q8IY18 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC5Q8IY18 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC5Q8IY18 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC5Q8IY18 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC5Q8IY18 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMC5Q8IY18 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.51■■□□□ 1.51
SMC5Q8IY18 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 TFP1-202ENST00000475455 1573 ntBASIC24.51■■□□□ 1.51
SMC5Q8IY18 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.51■■□□□ 1.51
SMC5Q8IY18 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SMC5Q8IY18 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 AC006970.2-201ENST00000450065 779 ntBASIC24.51■■□□□ 1.51
SMC5Q8IY18 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.51■■□□□ 1.51
SMC5Q8IY18 MYC-209ENST00000641252 345 ntBASIC24.51■■□□□ 1.51
SMC5Q8IY18 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.51■■□□□ 1.51
SMC5Q8IY18 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SMC5Q8IY18 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SMC5Q8IY18 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.51■■□□□ 1.51
SMC5Q8IY18 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.51■■□□□ 1.51
SMC5Q8IY18 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
SMC5Q8IY18 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.5■■□□□ 1.51
SMC5Q8IY18 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SMC5Q8IY18 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.5■■□□□ 1.51
SMC5Q8IY18 AC018445.3-201ENST00000624177 1945 ntBASIC24.5■■□□□ 1.51
SMC5Q8IY18 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.5■■□□□ 1.51
SMC5Q8IY18 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMC5Q8IY18 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMC5Q8IY18 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.5■■□□□ 1.51
SMC5Q8IY18 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SMC5Q8IY18 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMC5Q8IY18 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.49■■□□□ 1.51
SMC5Q8IY18 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.49■■□□□ 1.51
SMC5Q8IY18 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.49■■□□□ 1.51
SMC5Q8IY18 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.49■■□□□ 1.51
SMC5Q8IY18 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SMC5Q8IY18 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMC5Q8IY18 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.49■■□□□ 1.51
SMC5Q8IY18 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMC5Q8IY18 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
SMC5Q8IY18 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SMC5Q8IY18 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMC5Q8IY18 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMC5Q8IY18 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMC5Q8IY18 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SMC5Q8IY18 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
SMC5Q8IY18 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.48■■□□□ 1.51
SMC5Q8IY18 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.48■■□□□ 1.51
SMC5Q8IY18 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.48■■□□□ 1.51
SMC5Q8IY18 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.48■■□□□ 1.51
SMC5Q8IY18 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SMC5Q8IY18 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms