Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
UBR1Q8IWV7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 KRT18P38-201ENST00000449496 1282 ntBASIC28.38■■■□□ 2.13
UBR1Q8IWV7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 AC011558.1-201ENST00000623459 338 ntBASIC28.38■■■□□ 2.13
UBR1Q8IWV7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 ECEL1P1-201ENST00000373592 1742 ntBASIC28.38■■■□□ 2.13
UBR1Q8IWV7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 AC026396.1-201ENST00000419388 421 ntBASIC28.38■■■□□ 2.13
UBR1Q8IWV7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 AL023803.3-201ENST00000615559 522 ntBASIC28.38■■■□□ 2.13
UBR1Q8IWV7 AC130371.2-201ENST00000619443 611 ntBASIC28.38■■■□□ 2.13
UBR1Q8IWV7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBR1Q8IWV7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC28.37■■■□□ 2.13
UBR1Q8IWV7 AL023973.1-201ENST00000624619 620 ntBASIC28.37■■■□□ 2.13
UBR1Q8IWV7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.37■■■□□ 2.13
UBR1Q8IWV7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 AC012313.10-201ENST00000623509 926 ntBASIC28.36■■■□□ 2.13
UBR1Q8IWV7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
UBR1Q8IWV7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC28.35■■■□□ 2.13
UBR1Q8IWV7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 Z98882.1-201ENST00000622160 2253 ntBASIC28.34■■■□□ 2.13
UBR1Q8IWV7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC28.34■■■□□ 2.13
UBR1Q8IWV7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
UBR1Q8IWV7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 HOMER2P1-201ENST00000455653 964 ntBASIC28.32■■■□□ 2.12
UBR1Q8IWV7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC28.32■■■□□ 2.12
UBR1Q8IWV7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms