Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK3Q8IV63 TMEM179-206ENST00000616017 1645 ntBASIC19.39■□□□□ 0.69
VRK3Q8IV63 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK3Q8IV63 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.39■□□□□ 0.69
VRK3Q8IV63 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK3Q8IV63 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK3Q8IV63 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK3Q8IV63 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VRK3Q8IV63 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK3Q8IV63 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 POM121L13P-201ENST00000422362 380 ntBASIC19.38■□□□□ 0.69
VRK3Q8IV63 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 AC009237.14-201ENST00000609975 1594 ntBASIC19.38■□□□□ 0.69
VRK3Q8IV63 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VRK3Q8IV63 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VRK3Q8IV63 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VRK3Q8IV63 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.37■□□□□ 0.69
VRK3Q8IV63 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VRK3Q8IV63 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.37■□□□□ 0.69
VRK3Q8IV63 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VRK3Q8IV63 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.37■□□□□ 0.69
VRK3Q8IV63 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.37■□□□□ 0.69
VRK3Q8IV63 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.37■□□□□ 0.69
VRK3Q8IV63 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK3Q8IV63 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VRK3Q8IV63 AP001271.2-201ENST00000624018 1556 ntBASIC19.36■□□□□ 0.69
VRK3Q8IV63 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK3Q8IV63 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK3Q8IV63 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK3Q8IV63 TSPY20P-201ENST00000450910 630 ntBASIC19.36■□□□□ 0.69
VRK3Q8IV63 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.36■□□□□ 0.69
VRK3Q8IV63 TFP1-202ENST00000475455 1573 ntBASIC19.36■□□□□ 0.69
VRK3Q8IV63 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK3Q8IV63 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.35■□□□□ 0.69
VRK3Q8IV63 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VRK3Q8IV63 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK3Q8IV63 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK3Q8IV63 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK3Q8IV63 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VRK3Q8IV63 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.34■□□□□ 0.69
VRK3Q8IV63 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK3Q8IV63 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK3Q8IV63 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
VRK3Q8IV63 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms