Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21■□□□□ 0.95
RNF135Q8IUD6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21■□□□□ 0.95
RNF135Q8IUD6 FITM1-202ENST00000559294 800 ntBASIC21■□□□□ 0.95
RNF135Q8IUD6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF135Q8IUD6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21■□□□□ 0.95
RNF135Q8IUD6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF135Q8IUD6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 PGM5P4-201ENST00000421970 445 ntBASIC20.98■□□□□ 0.95
RNF135Q8IUD6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.98■□□□□ 0.95
RNF135Q8IUD6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF135Q8IUD6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF135Q8IUD6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 AP002982.1-201ENST00000492365 877 ntBASIC20.96■□□□□ 0.95
RNF135Q8IUD6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 AC010203.1-204ENST00000548782 407 ntBASIC20.96■□□□□ 0.95
RNF135Q8IUD6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF135Q8IUD6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF135Q8IUD6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.95■□□□□ 0.94
RNF135Q8IUD6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 KRT126P-201ENST00000549467 1181 ntBASIC20.95■□□□□ 0.94
RNF135Q8IUD6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms