Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 GPX1P1-201ENST00000388829 606 ntBASIC18.3■□□□□ 0.52
VRK2Q86Y07 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK2Q86Y07 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.3■□□□□ 0.52
VRK2Q86Y07 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 PHGDH-210ENST00000641115 1638 ntBASIC18.29■□□□□ 0.52
VRK2Q86Y07 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 AP001271.2-201ENST00000624018 1556 ntBASIC18.29■□□□□ 0.52
VRK2Q86Y07 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VRK2Q86Y07 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK2Q86Y07 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VRK2Q86Y07 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VRK2Q86Y07 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VRK2Q86Y07 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VRK2Q86Y07 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VRK2Q86Y07 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VRK2Q86Y07 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VRK2Q86Y07 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VRK2Q86Y07 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
VRK2Q86Y07 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.27■□□□□ 0.52
VRK2Q86Y07 AC093484.2-201ENST00000580996 2166 ntBASIC18.27■□□□□ 0.52
VRK2Q86Y07 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.27■□□□□ 0.52
VRK2Q86Y07 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.27■□□□□ 0.52
VRK2Q86Y07 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.27■□□□□ 0.52
VRK2Q86Y07 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.27■□□□□ 0.52
VRK2Q86Y07 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.27■□□□□ 0.52
VRK2Q86Y07 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.27■□□□□ 0.52
VRK2Q86Y07 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK2Q86Y07 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
VRK2Q86Y07 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
VRK2Q86Y07 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VRK2Q86Y07 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
VRK2Q86Y07 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.26■□□□□ 0.51
VRK2Q86Y07 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 AC006970.2-201ENST00000450065 779 ntBASIC18.26■□□□□ 0.51
VRK2Q86Y07 AC083906.2-201ENST00000511578 360 ntBASIC18.26■□□□□ 0.51
VRK2Q86Y07 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.26■□□□□ 0.51
VRK2Q86Y07 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.26■□□□□ 0.51
VRK2Q86Y07 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms