Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 MIR1238-201ENST00000408483 83 ntBASIC20.2■□□□□ 0.82
C12orf40Q86WS4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 AC116562.2-201ENST00000507042 360 ntBASIC20.2■□□□□ 0.82
C12orf40Q86WS4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf40Q86WS4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.19■□□□□ 0.82
C12orf40Q86WS4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.18■□□□□ 0.82
C12orf40Q86WS4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.18■□□□□ 0.82
C12orf40Q86WS4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 PHGDH-210ENST00000641115 1638 ntBASIC20.17■□□□□ 0.82
C12orf40Q86WS4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 YBX1P10-201ENST00000444752 975 ntBASIC20.17■□□□□ 0.82
C12orf40Q86WS4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 CYP2D8P-201ENST00000433633 1490 ntBASIC20.17■□□□□ 0.82
C12orf40Q86WS4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf40Q86WS4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 MESTP1-201ENST00000404287 994 ntBASIC20.16■□□□□ 0.82
C12orf40Q86WS4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 KRT18P16-201ENST00000510337 1294 ntBASIC20.16■□□□□ 0.82
C12orf40Q86WS4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 RN7SL850P-201ENST00000579959 291 ntBASIC20.16■□□□□ 0.82
C12orf40Q86WS4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 AC145285.6-201ENST00000604632 637 ntBASIC20.16■□□□□ 0.82
C12orf40Q86WS4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf40Q86WS4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms