Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 AC066615.1-201ENST00000640911 628 ntBASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 AL391422.3-201ENST00000603791 2761 ntBASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 LINC01521-201ENST00000504184 1943 ntBASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM4Q86VH4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 AP006587.1-201ENST00000534129 1502 ntBASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 AC099778.1-201ENST00000568593 1911 ntBASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM4Q86VH4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 AC004264.1-201ENST00000608354 794 ntBASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRRTM4Q86VH4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 AP001271.2-201ENST00000624018 1556 ntBASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms