Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 AF213884.3-201ENST00000563833 479 ntBASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 WIZP1-201ENST00000531444 2299 ntBASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 AC006333.2-201ENST00000607957 2099 ntBASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
YTHDF3Q7Z739 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 AL136967.2-201ENST00000623968 743 ntBASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
YTHDF3Q7Z739 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
YTHDF3Q7Z739 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
YTHDF3Q7Z739 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
YTHDF3Q7Z739 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
YTHDF3Q7Z739 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.58■□□□□ 0.73
YTHDF3Q7Z739 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
YTHDF3Q7Z739 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 DUX4L19-201ENST00000557448 1267 ntBASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
YTHDF3Q7Z739 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 AC009237.14-201ENST00000609975 1594 ntBASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 pRNA.6-201ENST00000610482 90 ntBASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 pRNA.5-201ENST00000612139 90 ntBASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 pRNA.11-201ENST00000618423 90 ntBASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 pRNA.13-201ENST00000619112 90 ntBASIC19.57■□□□□ 0.72
YTHDF3Q7Z739 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms