Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NIPA1Q7RTP0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.25■■□□□ 1.15
NIPA1Q7RTP0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
NIPA1Q7RTP0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 C1QL1P1-201ENST00000568105 661 ntBASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 MIR4497-201ENST00000583208 89 ntBASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 AC113410.3-201ENST00000623366 203 ntBASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NIPA1Q7RTP0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NIPA1Q7RTP0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 TUBB8P6-201ENST00000436895 1288 ntBASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.22■■□□□ 1.15
NIPA1Q7RTP0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 LINC01521-201ENST00000504184 1943 ntBASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 TMEM179-206ENST00000616017 1645 ntBASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 AC073195.1-201ENST00000607241 877 ntBASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NIPA1Q7RTP0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.2■■□□□ 1.15
NIPA1Q7RTP0 AL157384.1-201ENST00000445995 2473 ntBASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 SNORA78-201ENST00000459373 127 ntBASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.2■■□□□ 1.14
NIPA1Q7RTP0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NIPA1Q7RTP0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NIPA1Q7RTP0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
NIPA1Q7RTP0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NIPA1Q7RTP0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
NIPA1Q7RTP0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms