Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 KRT18P29-201ENST00000397031 1267 ntBASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 AL390719.1-204ENST00000412397 1219 ntBASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP1BQ7LBR1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 ESRRAP1-201ENST00000400596 1257 ntBASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 UNC93B5-201ENST00000530315 699 ntBASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 AL020996.1-203ENST00000536896 2307 ntBASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 LINC01006-201ENST00000333319 2292 ntBASIC18.19■□□□□ 0.5
CHMP1BQ7LBR1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 PNMA6B-201ENST00000538162 1200 ntBASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP1BQ7LBR1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 AP003097.1-201ENST00000530657 1135 ntBASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms