Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KDM3BQ7LBC6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 MESTP1-201ENST00000404287 994 ntBASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 AL445675.2-201ENST00000620291 557 ntBASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3BQ7LBC6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.41■■□□□ 1.66
KDM3BQ7LBC6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.4■■□□□ 1.66
KDM3BQ7LBC6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 TUBB8P6-201ENST00000436895 1288 ntBASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3BQ7LBC6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
KDM3BQ7LBC6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
KDM3BQ7LBC6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
KDM3BQ7LBC6 AL691432.2-201ENST00000607222 2038 ntBASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 UNC93B2-201ENST00000285383 730 ntBASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.38■■□□□ 1.65
KDM3BQ7LBC6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 AP000525.1-201ENST00000608286 694 ntBASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3BQ7LBC6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 AC004980.1-204ENST00000429707 299 ntBASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 AL355355.2-201ENST00000442321 338 ntBASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 MIR6786-201ENST00000616843 113 ntBASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 HLA-A-209ENST00000638375 975 ntBASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
KDM3BQ7LBC6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms