Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 RBM17P1-201ENST00000453646 1190 ntBASIC25.08■■□□□ 1.61
COPS6Q7L5N1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 C1QL1P1-201ENST00000568105 661 ntBASIC25.08■■□□□ 1.61
COPS6Q7L5N1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 AC012306.2-201ENST00000609350 630 ntBASIC25.08■■□□□ 1.61
COPS6Q7L5N1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
COPS6Q7L5N1 AC079598.2-202ENST00000546624 1451 ntBASIC25.08■■□□□ 1.6
COPS6Q7L5N1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 YBX1P10-201ENST00000444752 975 ntBASIC25.07■■□□□ 1.6
COPS6Q7L5N1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 KRT18P16-201ENST00000510337 1294 ntBASIC25.07■■□□□ 1.6
COPS6Q7L5N1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.07■■□□□ 1.6
COPS6Q7L5N1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.07■■□□□ 1.6
COPS6Q7L5N1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 KRT16P1-201ENST00000399124 1418 ntBASIC25.06■■□□□ 1.6
COPS6Q7L5N1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 AC097493.4-201ENST00000641197 219 ntBASIC25.06■■□□□ 1.6
COPS6Q7L5N1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
COPS6Q7L5N1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 MMP23A-201ENST00000234610 1017 ntBASIC25.05■■□□□ 1.6
COPS6Q7L5N1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.05■■□□□ 1.6
COPS6Q7L5N1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 AC116562.2-201ENST00000507042 360 ntBASIC25.04■■□□□ 1.6
COPS6Q7L5N1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COPS6Q7L5N1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 FAM210CP-201ENST00000445714 574 ntBASIC25.03■■□□□ 1.6
COPS6Q7L5N1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 AP000525.1-201ENST00000608286 694 ntBASIC25.03■■□□□ 1.6
COPS6Q7L5N1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COPS6Q7L5N1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms