Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF44Q7L0R7 AC116351.2-201ENST00000606540 1585 ntBASIC18.98■□□□□ 0.63
RNF44Q7L0R7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 C1QBPP2-201ENST00000528754 825 ntBASIC18.97■□□□□ 0.63
RNF44Q7L0R7 PRKY-204ENST00000533551 1019 ntBASIC18.97■□□□□ 0.63
RNF44Q7L0R7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 AL359736.2-201ENST00000621992 437 ntBASIC18.97■□□□□ 0.63
RNF44Q7L0R7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF44Q7L0R7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 PHGDH-210ENST00000641115 1638 ntBASIC18.96■□□□□ 0.63
RNF44Q7L0R7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 AC239809.2-201ENST00000415381 517 ntBASIC18.96■□□□□ 0.63
RNF44Q7L0R7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 RPPH1-201ENST00000516869 333 ntBASIC18.96■□□□□ 0.63
RNF44Q7L0R7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 AC142381.4-202ENST00000563973 229 ntBASIC18.96■□□□□ 0.63
RNF44Q7L0R7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF44Q7L0R7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 AC133681.1-201ENST00000465482 601 ntBASIC18.95■□□□□ 0.62
RNF44Q7L0R7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF44Q7L0R7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms