Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTCHD4Q6ZW05 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 MYCNOS-205ENST00000641950 531 ntBASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCHD4Q6ZW05 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCHD4Q6ZW05 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 NTF6G-201ENST00000591094 616 ntBASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCHD4Q6ZW05 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.14■□□□□ 0.5
PTCHD4Q6ZW05 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms