Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.21■□□□□ 0.34
C11orf88Q6PI97 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 AL158211.5-201ENST00000623583 2518 ntBASIC17.2■□□□□ 0.34
C11orf88Q6PI97 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf88Q6PI97 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.19■□□□□ 0.34
C11orf88Q6PI97 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 TPRG1LP1-201ENST00000598702 760 ntBASIC17.19■□□□□ 0.34
C11orf88Q6PI97 IKBKGP1-201ENST00000612193 1073 ntBASIC17.19■□□□□ 0.34
C11orf88Q6PI97 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf88Q6PI97 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.18■□□□□ 0.34
C11orf88Q6PI97 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 AC092437.1-201ENST00000624794 1048 ntBASIC17.17■□□□□ 0.34
C11orf88Q6PI97 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms