Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 AL121829.2-201ENST00000620908 328 ntBASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R3AQ6IN85 AC112907.3-201ENST00000577781 2400 ntBASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R3AQ6IN85 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 AC069544.1-201ENST00000609399 999 ntBASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R3AQ6IN85 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 AC018553.1-201ENST00000616682 1458 ntBASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 TFP1-202ENST00000475455 1573 ntBASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 AP001271.2-201ENST00000624018 1556 ntBASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 FAM201B-201ENST00000458407 597 ntBASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 AC006058.3-201ENST00000606217 1069 ntBASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 AL121906.2-201ENST00000621597 723 ntBASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R3AQ6IN85 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 AC009237.14-201ENST00000609975 1594 ntBASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 AC073648.6-201ENST00000641589 218 ntBASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R3AQ6IN85 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms