Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LPCAT4Q643R3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LPCAT4Q643R3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 EEF1DP3-203ENST00000566025 782 ntBASIC18.64■□□□□ 0.57
LPCAT4Q643R3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 AL138724.1-201ENST00000606771 1088 ntBASIC18.64■□□□□ 0.57
LPCAT4Q643R3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 KRT8P36-201ENST00000489121 1440 ntBASIC18.64■□□□□ 0.57
LPCAT4Q643R3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT4Q643R3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 AC068880.1-201ENST00000507289 2297 ntBASIC18.63■□□□□ 0.57
LPCAT4Q643R3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 AC138932.1-201ENST00000534164 6830 ntBASIC18.63■□□□□ 0.57
LPCAT4Q643R3 SERBP1P1-201ENST00000396021 1160 ntBASIC18.63■□□□□ 0.57
LPCAT4Q643R3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 AC053503.5-201ENST00000601508 636 ntBASIC18.63■□□□□ 0.57
LPCAT4Q643R3 AL356740.2-201ENST00000601559 647 ntBASIC18.63■□□□□ 0.57
LPCAT4Q643R3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.63■□□□□ 0.57
LPCAT4Q643R3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 AC009237.14-201ENST00000609975 1594 ntBASIC18.63■□□□□ 0.57
LPCAT4Q643R3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LPCAT4Q643R3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 SRD5A1P1-201ENST00000442297 786 ntBASIC18.62■□□□□ 0.57
LPCAT4Q643R3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.62■□□□□ 0.57
LPCAT4Q643R3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 AC090164.3-201ENST00000610780 2143 ntBASIC18.62■□□□□ 0.57
LPCAT4Q643R3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LPCAT4Q643R3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms