Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RNF220Q5VTB9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF220Q5VTB9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19■□□□□ 0.63
RNF220Q5VTB9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RNF220Q5VTB9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19■□□□□ 0.63
RNF220Q5VTB9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF220Q5VTB9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19■□□□□ 0.63
RNF220Q5VTB9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19■□□□□ 0.63
RNF220Q5VTB9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19■□□□□ 0.63
RNF220Q5VTB9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF220Q5VTB9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF220Q5VTB9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF220Q5VTB9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RNF220Q5VTB9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19■□□□□ 0.63
RNF220Q5VTB9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19■□□□□ 0.63
RNF220Q5VTB9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF220Q5VTB9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF220Q5VTB9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
RNF220Q5VTB9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19■□□□□ 0.63
RNF220Q5VTB9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF220Q5VTB9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF220Q5VTB9 AL138781.2-201ENST00000617896 1843 ntBASIC19■□□□□ 0.63
RNF220Q5VTB9 AC004854.2-201ENST00000608450 1441 ntBASIC19■□□□□ 0.63
RNF220Q5VTB9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.99■□□□□ 0.63
RNF220Q5VTB9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.99■□□□□ 0.63
RNF220Q5VTB9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF220Q5VTB9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 SLC7A5P2-201ENST00000553010 536 ntBASIC18.98■□□□□ 0.63
RNF220Q5VTB9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 AC020763.4-201ENST00000623414 4170 ntBASIC18.98■□□□□ 0.63
RNF220Q5VTB9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF220Q5VTB9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms