Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 AC117947.1-201ENST00000427448 529 ntBASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 CRYGFP-201ENST00000418459 633 ntBASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC30.16■■■□□ 2.42
CDC42BPAQ5VT25 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 Z85996.1-201ENST00000494644 937 ntBASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CDC42BPAQ5VT25 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 HMGA1P5-201ENST00000412453 271 ntBASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 AK4P3-201ENST00000418260 669 ntBASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 LIN28AP1-201ENST00000429574 405 ntBASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC30.14■■■□□ 2.42
CDC42BPAQ5VT25 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
CDC42BPAQ5VT25 AC007225.1-201ENST00000566331 1836 ntBASIC30.14■■■□□ 2.41
CDC42BPAQ5VT25 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 MFAP1P1-201ENST00000442257 1255 ntBASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 AC131212.4-201ENST00000623606 975 ntBASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC30.13■■■□□ 2.41
CDC42BPAQ5VT25 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 AC011298.2-201ENST00000617989 482 ntBASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPAQ5VT25 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDC42BPAQ5VT25 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
CDC42BPAQ5VT25 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.11■■■□□ 2.41
CDC42BPAQ5VT25 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
CDC42BPAQ5VT25 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDC42BPAQ5VT25 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 AC087388.1-201ENST00000571370 1112 ntBASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 KRT16P6-202ENST00000425692 1426 ntBASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPAQ5VT25 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 FAM8A6P-201ENST00000407496 1135 ntBASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 AP000692.2-201ENST00000608391 879 ntBASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms