Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 YBX1P10-201ENST00000444752 975 ntBASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 AF186192.3-201ENST00000583427 947 ntBASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARFGEF3Q5TH69 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 AC004264.1-201ENST00000608354 794 ntBASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 PCDHAC2-203ENST00000615316 3011 ntBASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 AP003071.4-201ENST00000562276 1284 ntBASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ARFGEF3Q5TH69 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ARFGEF3Q5TH69 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ARFGEF3Q5TH69 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ARFGEF3Q5TH69 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ARFGEF3Q5TH69 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
ARFGEF3Q5TH69 AC018553.1-201ENST00000616682 1458 ntBASIC16.83■□□□□ 0.29
ARFGEF3Q5TH69 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ARFGEF3Q5TH69 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 KRT8P9-201ENST00000558927 1449 ntBASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 AP005212.1-201ENST00000581547 1997 ntBASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARFGEF3Q5TH69 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 TSPY15P-201ENST00000457163 923 ntBASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 AC211429.1-201ENST00000415277 523 ntBASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 NIFKP9-201ENST00000419265 221 ntBASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 REXO1L10P-201ENST00000615707 1290 ntBASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 REXO1L12P-201ENST00000622156 912 ntBASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 HTR7P1-201ENST00000538670 1336 ntBASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ARFGEF3Q5TH69 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 AC092720.2-201ENST00000602388 1665 ntBASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms