Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRK2Q5S007 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRK2Q5S007 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRK2Q5S007 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 AC004870.1-201ENST00000315132 882 ntBASIC17.28■□□□□ 0.36
LRRK2Q5S007 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 KRT18P38-201ENST00000449496 1282 ntBASIC17.28■□□□□ 0.36
LRRK2Q5S007 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 AL160237.2-201ENST00000556165 472 ntBASIC17.28■□□□□ 0.36
LRRK2Q5S007 AL732292.2-201ENST00000609649 430 ntBASIC17.28■□□□□ 0.36
LRRK2Q5S007 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRK2Q5S007 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRK2Q5S007 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRK2Q5S007 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRK2Q5S007 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRK2Q5S007 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 Z85996.1-201ENST00000494644 937 ntBASIC17.27■□□□□ 0.36
LRRK2Q5S007 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 AC080038.3-201ENST00000623346 1952 ntBASIC17.27■□□□□ 0.36
LRRK2Q5S007 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRK2Q5S007 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRK2Q5S007 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRK2Q5S007 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRK2Q5S007 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 AC106795.1-205ENST00000512851 1056 ntBASIC17.27■□□□□ 0.36
LRRK2Q5S007 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRK2Q5S007 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRRK2Q5S007 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRK2Q5S007 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.27■□□□□ 0.35
LRRK2Q5S007 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.27■□□□□ 0.35
LRRK2Q5S007 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.27■□□□□ 0.35
LRRK2Q5S007 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LRRK2Q5S007 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRK2Q5S007 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRK2Q5S007 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRK2Q5S007 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRK2Q5S007 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRK2Q5S007 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 AC127496.7-201ENST00000625110 1798 ntBASIC17.26■□□□□ 0.35
LRRK2Q5S007 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRK2Q5S007 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRK2Q5S007 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 PRELID1P1-202ENST00000567272 903 ntBASIC17.26■□□□□ 0.35
LRRK2Q5S007 SLC25A6P4-201ENST00000586535 553 ntBASIC17.26■□□□□ 0.35
LRRK2Q5S007 AL355385.1-201ENST00000606123 409 ntBASIC17.26■□□□□ 0.35
LRRK2Q5S007 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRK2Q5S007 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRRK2Q5S007 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 AP000523.1-201ENST00000398242 1049 ntBASIC17.25■□□□□ 0.35
LRRK2Q5S007 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRK2Q5S007 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRRK2Q5S007 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRRK2Q5S007 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRK2Q5S007 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRK2Q5S007 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRK2Q5S007 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms