Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RSPO4Q2I0M5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RSPO4Q2I0M5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 MFAP1P1-201ENST00000442257 1255 ntBASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 AL512604.3-201ENST00000569583 964 ntBASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 AC008622.2-201ENST00000617006 1229 ntBASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 EP400NL-214ENST00000641289 2402 ntBASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.26■□□□□ 0.67
RSPO4Q2I0M5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 AC139530.3-201ENST00000620344 690 ntBASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO4Q2I0M5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 UNC93B7-201ENST00000509439 705 ntBASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.24■□□□□ 0.67
RSPO4Q2I0M5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 AC009078.2-202ENST00000463353 338 ntBASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 ZNF444P1-201ENST00000559497 298 ntBASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.23■□□□□ 0.67
RSPO4Q2I0M5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 HLA-G-203ENST00000376818 1127 ntBASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 AC092338.2-201ENST00000568827 1415 ntBASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms