Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.83■■□□□ 1.4
PDS5AQ29RF7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.83■■□□□ 1.4
PDS5AQ29RF7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDS5AQ29RF7 AC012306.2-201ENST00000609350 630 ntBASIC23.83■■□□□ 1.4
PDS5AQ29RF7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.83■■□□□ 1.4
PDS5AQ29RF7 GABARAPL3-202ENST00000624044 1851 ntBASIC23.82■■□□□ 1.4
PDS5AQ29RF7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 AL137060.1-201ENST00000618151 2648 ntBASIC23.82■■□□□ 1.4
PDS5AQ29RF7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.82■■□□□ 1.4
PDS5AQ29RF7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 TMEM179-206ENST00000616017 1645 ntBASIC23.81■■□□□ 1.4
PDS5AQ29RF7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 AC211429.1-201ENST00000415277 523 ntBASIC23.81■■□□□ 1.4
PDS5AQ29RF7 RBM17P1-201ENST00000453646 1190 ntBASIC23.81■■□□□ 1.4
PDS5AQ29RF7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 LINC01023-201ENST00000606054 436 ntBASIC23.81■■□□□ 1.4
PDS5AQ29RF7 CR392000.1-201ENST00000624770 1228 ntBASIC23.81■■□□□ 1.4
PDS5AQ29RF7 AC097493.4-201ENST00000641197 219 ntBASIC23.81■■□□□ 1.4
PDS5AQ29RF7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDS5AQ29RF7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.8■■□□□ 1.4
PDS5AQ29RF7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.8■■□□□ 1.4
PDS5AQ29RF7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 AL031985.4-201ENST00000642138 673 ntBASIC23.79■■□□□ 1.4
PDS5AQ29RF7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.79■■□□□ 1.4
PDS5AQ29RF7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.78■■□□□ 1.4
PDS5AQ29RF7 AL512408.1-201ENST00000569378 2000 ntBASIC23.77■■□□□ 1.4
PDS5AQ29RF7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 FEM1AP1-201ENST00000431297 1995 ntBASIC23.77■■□□□ 1.4
PDS5AQ29RF7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms