Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA1Q09470 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA1Q09470 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNA1Q09470 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNA1Q09470 AC233263.1-201ENST00000578059 224 ntBASIC21.78■■□□□ 1.08
KCNA1Q09470 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNA1Q09470 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
KCNA1Q09470 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNA1Q09470 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNA1Q09470 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA1Q09470 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA1Q09470 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNA1Q09470 AC018553.1-201ENST00000616682 1458 ntBASIC21.77■■□□□ 1.08
KCNA1Q09470 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNA1Q09470 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNA1Q09470 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNA1Q09470 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA1Q09470 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA1Q09470 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA1Q09470 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA1Q09470 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA1Q09470 ESRRAP1-201ENST00000400596 1257 ntBASIC21.77■■□□□ 1.08
KCNA1Q09470 AC026366.1-201ENST00000488803 879 ntBASIC21.77■■□□□ 1.08
KCNA1Q09470 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.77■■□□□ 1.08
KCNA1Q09470 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.77■■□□□ 1.08
KCNA1Q09470 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA1Q09470 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
KCNA1Q09470 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
KCNA1Q09470 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
KCNA1Q09470 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
KCNA1Q09470 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
KCNA1Q09470 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
KCNA1Q09470 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNA1Q09470 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.76■■□□□ 1.07
KCNA1Q09470 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNA1Q09470 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNA1Q09470 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.76■■□□□ 1.07
KCNA1Q09470 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNA1Q09470 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNA1Q09470 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.76■■□□□ 1.07
KCNA1Q09470 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.76■■□□□ 1.07
KCNA1Q09470 AC116351.2-201ENST00000606540 1585 ntBASIC21.76■■□□□ 1.07
KCNA1Q09470 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.76■■□□□ 1.07
KCNA1Q09470 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA1Q09470 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.75■■□□□ 1.07
KCNA1Q09470 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KCNA1Q09470 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNA1Q09470 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
KCNA1Q09470 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.75■■□□□ 1.07
KCNA1Q09470 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.75■■□□□ 1.07
KCNA1Q09470 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNA1Q09470 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNA1Q09470 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.75■■□□□ 1.07
KCNA1Q09470 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.75■■□□□ 1.07
KCNA1Q09470 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNA1Q09470 TMEM179-206ENST00000616017 1645 ntBASIC21.75■■□□□ 1.07
KCNA1Q09470 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KCNA1Q09470 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA1Q09470 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 AC009237.14-201ENST00000609975 1594 ntBASIC21.74■■□□□ 1.07
KCNA1Q09470 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
KCNA1Q09470 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNA1Q09470 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 POM121L13P-201ENST00000422362 380 ntBASIC21.74■■□□□ 1.07
KCNA1Q09470 TSPY20P-201ENST00000450910 630 ntBASIC21.74■■□□□ 1.07
KCNA1Q09470 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNA1Q09470 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNA1Q09470 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.74■■□□□ 1.07
KCNA1Q09470 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNA1Q09470 AL158211.5-201ENST00000623583 2518 ntBASIC21.74■■□□□ 1.07
KCNA1Q09470 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA1Q09470 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms