Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.59■□□□□ 0.09
CCL20P78556 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCL20P78556 AC006333.2-201ENST00000607957 2099 ntBASIC15.59■□□□□ 0.09
CCL20P78556 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCL20P78556 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.59■□□□□ 0.09
CCL20P78556 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.59■□□□□ 0.09
CCL20P78556 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.59■□□□□ 0.09
CCL20P78556 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCL20P78556 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CCL20P78556 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCL20P78556 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.58■□□□□ 0.09
CCL20P78556 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCL20P78556 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCL20P78556 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCL20P78556 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.58■□□□□ 0.08
CCL20P78556 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.58■□□□□ 0.08
CCL20P78556 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.58■□□□□ 0.08
CCL20P78556 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 WIZP1-201ENST00000531444 2299 ntBASIC15.58■□□□□ 0.08
CCL20P78556 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCL20P78556 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.58■□□□□ 0.08
CCL20P78556 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.58■□□□□ 0.08
CCL20P78556 MIR6724-1-201ENST00000616420 92 ntBASIC15.58■□□□□ 0.08
CCL20P78556 MIR6724-2-201ENST00000616483 92 ntBASIC15.58■□□□□ 0.08
CCL20P78556 MIR6724-4-201ENST00000617390 92 ntBASIC15.58■□□□□ 0.08
CCL20P78556 MIR6724-3-201ENST00000622482 92 ntBASIC15.58■□□□□ 0.08
CCL20P78556 RARRES2P11-201ENST00000635158 484 ntBASIC15.58■□□□□ 0.08
CCL20P78556 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 AL354751.1-201ENST00000412768 1863 ntBASIC15.58■□□□□ 0.08
CCL20P78556 BICD1-207ENST00000551848 1962 ntBASIC15.58■□□□□ 0.08
CCL20P78556 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.58■□□□□ 0.08
CCL20P78556 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCL20P78556 AC009237.14-201ENST00000609975 1594 ntBASIC15.58■□□□□ 0.08
CCL20P78556 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCL20P78556 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.57■□□□□ 0.08
CCL20P78556 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.57■□□□□ 0.08
CCL20P78556 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCL20P78556 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CCL20P78556 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL20P78556 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL20P78556 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.57■□□□□ 0.08
CCL20P78556 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.57■□□□□ 0.08
CCL20P78556 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL20P78556 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL20P78556 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCL20P78556 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.57■□□□□ 0.08
CCL20P78556 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL20P78556 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.57■□□□□ 0.08
CCL20P78556 AL161938.1-201ENST00000569833 2180 ntBASIC15.56■□□□□ 0.08
CCL20P78556 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCL20P78556 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
CCL20P78556 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CCL20P78556 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL20P78556 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.56■□□□□ 0.08
CCL20P78556 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL20P78556 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.56■□□□□ 0.08
CCL20P78556 KRT8P36-201ENST00000489121 1440 ntBASIC15.56■□□□□ 0.08
CCL20P78556 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CCL20P78556 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL20P78556 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.56■□□□□ 0.08
CCL20P78556 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL20P78556 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL20P78556 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CCL20P78556 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms