Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.93■□□□□ 0.14
CX3CL1P78423 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 PTBP1P-201ENST00000554374 1601 ntBASIC15.93■□□□□ 0.14
CX3CL1P78423 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.92■□□□□ 0.14
CX3CL1P78423 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.92■□□□□ 0.14
CX3CL1P78423 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CL1P78423 AC099778.1-201ENST00000568593 1911 ntBASIC15.92■□□□□ 0.14
CX3CL1P78423 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CX3CL1P78423 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CL1P78423 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CX3CL1P78423 ID1-201ENST00000376105 1233 ntBASIC15.92■□□□□ 0.14
CX3CL1P78423 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CX3CL1P78423 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CX3CL1P78423 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CL1P78423 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CL1P78423 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.92■□□□□ 0.14
CX3CL1P78423 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.92■□□□□ 0.14
CX3CL1P78423 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.92■□□□□ 0.14
CX3CL1P78423 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CX3CL1P78423 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CL1P78423 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.92■□□□□ 0.14
CX3CL1P78423 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CL1P78423 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CX3CL1P78423 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CL1P78423 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.91■□□□□ 0.14
CX3CL1P78423 BX323043.1-201ENST00000641006 1765 ntBASIC15.91■□□□□ 0.14
CX3CL1P78423 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.91■□□□□ 0.14
CX3CL1P78423 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.91■□□□□ 0.14
CX3CL1P78423 AC097658.1-201ENST00000475555 843 ntBASIC15.91■□□□□ 0.14
CX3CL1P78423 AC142086.2-201ENST00000569753 217 ntBASIC15.91■□□□□ 0.14
CX3CL1P78423 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 AC018445.3-201ENST00000624177 1945 ntBASIC15.91■□□□□ 0.14
CX3CL1P78423 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 KRT8P17-201ENST00000453110 1448 ntBASIC15.91■□□□□ 0.14
CX3CL1P78423 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CX3CL1P78423 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CL1P78423 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CX3CL1P78423 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CX3CL1P78423 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CL1P78423 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CX3CL1P78423 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CX3CL1P78423 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CL1P78423 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 AL355802.2-201ENST00000402069 882 ntBASIC15.9■□□□□ 0.14
CX3CL1P78423 AC073210.2-201ENST00000430369 194 ntBASIC15.9■□□□□ 0.14
CX3CL1P78423 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CL1P78423 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CX3CL1P78423 AL031963.3-201ENST00000606441 850 ntBASIC15.9■□□□□ 0.14
CX3CL1P78423 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 AC133041.1-202ENST00000642053 222 ntBASIC15.9■□□□□ 0.14
CX3CL1P78423 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CL1P78423 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CL1P78423 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms