Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.98□□□□□ -0.17
RPL39P62891 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.98□□□□□ -0.17
RPL39P62891 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.98□□□□□ -0.17
RPL39P62891 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.98□□□□□ -0.17
RPL39P62891 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.98□□□□□ -0.17
RPL39P62891 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.98□□□□□ -0.17
RPL39P62891 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.98□□□□□ -0.17
RPL39P62891 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RPL39P62891 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.98□□□□□ -0.17
RPL39P62891 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.98□□□□□ -0.17
RPL39P62891 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.98□□□□□ -0.17
RPL39P62891 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RPL39P62891 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 LINC01465-201ENST00000408887 1940 ntBASIC13.98□□□□□ -0.17
RPL39P62891 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.98□□□□□ -0.17
RPL39P62891 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL39P62891 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
RPL39P62891 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL39P62891 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.97□□□□□ -0.17
RPL39P62891 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RPL39P62891 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RPL39P62891 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RPL39P62891 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 AC007322.3-201ENST00000426526 701 ntBASIC13.97□□□□□ -0.17
RPL39P62891 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.97□□□□□ -0.17
RPL39P62891 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL39P62891 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.97□□□□□ -0.17
RPL39P62891 SLC7A5P2-201ENST00000553010 536 ntBASIC13.97□□□□□ -0.17
RPL39P62891 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL39P62891 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RPL39P62891 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL39P62891 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL39P62891 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL39P62891 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL39P62891 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL39P62891 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.97□□□□□ -0.17
RPL39P62891 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL39P62891 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL39P62891 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL39P62891 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL39P62891 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.96□□□□□ -0.17
RPL39P62891 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RPL39P62891 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL39P62891 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 AC010141.2-201ENST00000452426 721 ntBASIC13.96□□□□□ -0.17
RPL39P62891 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.96□□□□□ -0.17
RPL39P62891 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.96□□□□□ -0.17
RPL39P62891 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 FAM21FP-204ENST00000608637 956 ntBASIC13.96□□□□□ -0.17
RPL39P62891 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RPL39P62891 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RPL39P62891 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RPL39P62891 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL39P62891 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.96□□□□□ -0.17
RPL39P62891 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RPL39P62891 LETM1P2-201ENST00000597330 2178 ntBASIC13.96□□□□□ -0.18
RPL39P62891 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
RPL39P62891 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL39P62891 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms