Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RPS3AP61247 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.5■□□□□ 0.55
RPS3AP61247 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS3AP61247 AC020916.1-201ENST00000587762 1774 ntBASIC18.5■□□□□ 0.55
RPS3AP61247 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS3AP61247 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS3AP61247 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
RPS3AP61247 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS3AP61247 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS3AP61247 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
RPS3AP61247 AC010980.2-201ENST00000587099 1412 ntBASIC18.49■□□□□ 0.55
RPS3AP61247 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS3AP61247 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS3AP61247 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS3AP61247 GUSBP6-202ENST00000438529 1198 ntBASIC18.49■□□□□ 0.55
RPS3AP61247 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS3AP61247 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RPS3AP61247 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS3AP61247 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS3AP61247 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS3AP61247 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS3AP61247 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS3AP61247 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS3AP61247 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS3AP61247 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.49■□□□□ 0.55
RPS3AP61247 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS3AP61247 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RPS3AP61247 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS3AP61247 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.48■□□□□ 0.55
RPS3AP61247 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.48■□□□□ 0.55
RPS3AP61247 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS3AP61247 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
RPS3AP61247 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 AC133041.1-202ENST00000642053 222 ntBASIC18.48■□□□□ 0.55
RPS3AP61247 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RPS3AP61247 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS3AP61247 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 FP700111.2-201ENST00000619190 1892 ntBASIC18.48■□□□□ 0.55
RPS3AP61247 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS3AP61247 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.47■□□□□ 0.55
RPS3AP61247 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS3AP61247 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS3AP61247 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS3AP61247 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS3AP61247 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS3AP61247 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS3AP61247 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS3AP61247 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS3AP61247 MCRIP2P1-201ENST00000394346 511 ntBASIC18.47■□□□□ 0.55
RPS3AP61247 MIPEPP3-201ENST00000412105 444 ntBASIC18.47■□□□□ 0.55
RPS3AP61247 BX276092.2-201ENST00000417668 665 ntBASIC18.47■□□□□ 0.55
RPS3AP61247 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS3AP61247 AL138781.1-201ENST00000566567 1274 ntBASIC18.47■□□□□ 0.55
RPS3AP61247 AC142086.2-201ENST00000569753 217 ntBASIC18.47■□□□□ 0.55
RPS3AP61247 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS3AP61247 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS3AP61247 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.47■□□□□ 0.55
RPS3AP61247 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RPS3AP61247 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS3AP61247 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.47■□□□□ 0.55
RPS3AP61247 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
RPS3AP61247 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS3AP61247 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS3AP61247 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS3AP61247 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS3AP61247 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.46■□□□□ 0.55
RPS3AP61247 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS3AP61247 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RPS3AP61247 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS3AP61247 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS3AP61247 LSM12P1-201ENST00000411836 588 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms