Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
EIF4A1P60842 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
EIF4A1P60842 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.43■■□□□ 1.66
EIF4A1P60842 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.43■■□□□ 1.66
EIF4A1P60842 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
EIF4A1P60842 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.42■■□□□ 1.66
EIF4A1P60842 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
EIF4A1P60842 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
EIF4A1P60842 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.42■■□□□ 1.66
EIF4A1P60842 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.42■■□□□ 1.66
EIF4A1P60842 REXO1L10P-201ENST00000615707 1290 ntBASIC25.42■■□□□ 1.66
EIF4A1P60842 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.42■■□□□ 1.66
EIF4A1P60842 CR392000.1-201ENST00000624770 1228 ntBASIC25.42■■□□□ 1.66
EIF4A1P60842 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
EIF4A1P60842 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
EIF4A1P60842 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.41■■□□□ 1.66
EIF4A1P60842 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.41■■□□□ 1.66
EIF4A1P60842 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.41■■□□□ 1.66
EIF4A1P60842 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.41■■□□□ 1.66
EIF4A1P60842 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.41■■□□□ 1.66
EIF4A1P60842 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
EIF4A1P60842 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.41■■□□□ 1.66
EIF4A1P60842 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
EIF4A1P60842 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
EIF4A1P60842 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.4■■□□□ 1.66
EIF4A1P60842 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.4■■□□□ 1.66
EIF4A1P60842 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
EIF4A1P60842 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.4■■□□□ 1.66
EIF4A1P60842 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
EIF4A1P60842 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
EIF4A1P60842 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
EIF4A1P60842 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
EIF4A1P60842 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
EIF4A1P60842 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.39■■□□□ 1.66
EIF4A1P60842 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
EIF4A1P60842 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
EIF4A1P60842 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
EIF4A1P60842 AC116562.2-201ENST00000507042 360 ntBASIC25.39■■□□□ 1.66
EIF4A1P60842 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.39■■□□□ 1.66
EIF4A1P60842 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.39■■□□□ 1.66
EIF4A1P60842 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
EIF4A1P60842 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
EIF4A1P60842 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
EIF4A1P60842 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
EIF4A1P60842 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
EIF4A1P60842 KRT16P1-201ENST00000399124 1418 ntBASIC25.38■■□□□ 1.65
EIF4A1P60842 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.38■■□□□ 1.65
EIF4A1P60842 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.38■■□□□ 1.65
EIF4A1P60842 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
EIF4A1P60842 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.38■■□□□ 1.65
EIF4A1P60842 RBM17P1-201ENST00000453646 1190 ntBASIC25.38■■□□□ 1.65
EIF4A1P60842 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.38■■□□□ 1.65
EIF4A1P60842 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.38■■□□□ 1.65
EIF4A1P60842 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.38■■□□□ 1.65
EIF4A1P60842 AC012306.2-201ENST00000609350 630 ntBASIC25.38■■□□□ 1.65
EIF4A1P60842 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.38■■□□□ 1.65
EIF4A1P60842 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
EIF4A1P60842 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.38■■□□□ 1.65
EIF4A1P60842 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
EIF4A1P60842 AC079598.2-202ENST00000546624 1451 ntBASIC25.38■■□□□ 1.65
EIF4A1P60842 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
EIF4A1P60842 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.38■■□□□ 1.65
EIF4A1P60842 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
EIF4A1P60842 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.37■■□□□ 1.65
EIF4A1P60842 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
EIF4A1P60842 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.37■■□□□ 1.65
EIF4A1P60842 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
EIF4A1P60842 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.37■■□□□ 1.65
EIF4A1P60842 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
EIF4A1P60842 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
EIF4A1P60842 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
EIF4A1P60842 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
EIF4A1P60842 TUBB8P6-201ENST00000436895 1288 ntBASIC25.37■■□□□ 1.65
EIF4A1P60842 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
EIF4A1P60842 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
EIF4A1P60842 GABARAPL3-202ENST00000624044 1851 ntBASIC25.36■■□□□ 1.65
EIF4A1P60842 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EIF4A1P60842 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EIF4A1P60842 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
EIF4A1P60842 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.36■■□□□ 1.65
EIF4A1P60842 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.36■■□□□ 1.65
EIF4A1P60842 AL445675.2-201ENST00000620291 557 ntBASIC25.36■■□□□ 1.65
EIF4A1P60842 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.36■■□□□ 1.65
EIF4A1P60842 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.36■■□□□ 1.65
EIF4A1P60842 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.36■■□□□ 1.65
EIF4A1P60842 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EIF4A1P60842 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
EIF4A1P60842 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
EIF4A1P60842 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EIF4A1P60842 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EIF4A1P60842 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms