Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
CLDN6P56747 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN6P56747 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLDN6P56747 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLDN6P56747 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN6P56747 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN6P56747 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN6P56747 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.05■□□□□ 0.64
CLDN6P56747 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN6P56747 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN6P56747 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CLDN6P56747 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN6P56747 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN6P56747 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN6P56747 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN6P56747 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN6P56747 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN6P56747 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN6P56747 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN6P56747 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN6P56747 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN6P56747 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN6P56747 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN6P56747 HLA-G-202ENST00000376815 851 ntBASIC19.04■□□□□ 0.64
CLDN6P56747 HLA-G-203ENST00000376818 1127 ntBASIC19.04■□□□□ 0.64
CLDN6P56747 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN6P56747 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN6P56747 AC011506.1-201ENST00000474329 610 ntBASIC19.04■□□□□ 0.64
CLDN6P56747 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN6P56747 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.04■□□□□ 0.64
CLDN6P56747 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN6P56747 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN6P56747 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CLDN6P56747 AL358472.4-201ENST00000633140 710 ntBASIC19.04■□□□□ 0.64
CLDN6P56747 AL024507.2-201ENST00000606070 2574 ntBASIC19.04■□□□□ 0.64
CLDN6P56747 AL121603.2-201ENST00000557373 2117 ntBASIC19.04■□□□□ 0.64
CLDN6P56747 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN6P56747 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN6P56747 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN6P56747 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN6P56747 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.03■□□□□ 0.64
CLDN6P56747 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN6P56747 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLDN6P56747 UPK3BP1-201ENST00000428678 509 ntBASIC19.03■□□□□ 0.64
CLDN6P56747 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN6P56747 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CLDN6P56747 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN6P56747 AL031985.4-201ENST00000642138 673 ntBASIC19.03■□□□□ 0.64
CLDN6P56747 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN6P56747 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN6P56747 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN6P56747 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN6P56747 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN6P56747 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.03■□□□□ 0.64
CLDN6P56747 Z98882.1-201ENST00000622160 2253 ntBASIC19.03■□□□□ 0.64
CLDN6P56747 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN6P56747 AC007375.3-201ENST00000600936 2314 ntBASIC19.02■□□□□ 0.64
CLDN6P56747 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN6P56747 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CLDN6P56747 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN6P56747 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLDN6P56747 CRYGFP-201ENST00000418459 633 ntBASIC19.02■□□□□ 0.64
CLDN6P56747 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN6P56747 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.02■□□□□ 0.64
CLDN6P56747 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN6P56747 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLDN6P56747 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN6P56747 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN6P56747 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLDN6P56747 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN6P56747 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.02■□□□□ 0.63
CLDN6P56747 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN6P56747 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.02■□□□□ 0.63
CLDN6P56747 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN6P56747 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN6P56747 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN6P56747 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN6P56747 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 AK4P3-201ENST00000418260 669 ntBASIC19.01■□□□□ 0.63
CLDN6P56747 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.01■□□□□ 0.63
CLDN6P56747 B3GAT3P1-201ENST00000471720 806 ntBASIC19.01■□□□□ 0.63
CLDN6P56747 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN6P56747 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CLDN6P56747 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms