Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC069236.1-201ENST00000604339 616 ntBASIC18.09■□□□□ 0.49
CDH11P55287 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH11P55287 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH11P55287 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH11P55287 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH11P55287 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH11P55287 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH11P55287 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH11P55287 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH11P55287 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH11P55287 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH11P55287 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH11P55287 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CDH11P55287 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
CDH11P55287 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH11P55287 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH11P55287 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH11P55287 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH11P55287 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.08■□□□□ 0.49
CDH11P55287 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH11P55287 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH11P55287 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDH11P55287 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH11P55287 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDH11P55287 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 AC005332.7-201ENST00000614046 2005 ntBASIC18.08■□□□□ 0.48
CDH11P55287 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH11P55287 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH11P55287 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH11P55287 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.07■□□□□ 0.48
CDH11P55287 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.07■□□□□ 0.48
CDH11P55287 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH11P55287 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH11P55287 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH11P55287 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDH11P55287 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH11P55287 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH11P55287 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH11P55287 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH11P55287 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH11P55287 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.06■□□□□ 0.48
CDH11P55287 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 AC007322.3-201ENST00000426526 701 ntBASIC18.06■□□□□ 0.48
CDH11P55287 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 FAM21FP-204ENST00000608637 956 ntBASIC18.06■□□□□ 0.48
CDH11P55287 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH11P55287 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH11P55287 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH11P55287 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH11P55287 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH11P55287 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH11P55287 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH11P55287 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDH11P55287 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH11P55287 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDH11P55287 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH11P55287 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH11P55287 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH11P55287 MKRN4P-201ENST00000444706 1521 ntBASIC18.05■□□□□ 0.48
CDH11P55287 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms