Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH6P55285 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH6P55285 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH6P55285 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDH6P55285 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH6P55285 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH6P55285 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH6P55285 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH6P55285 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH6P55285 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH6P55285 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH6P55285 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH6P55285 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDH6P55285 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH6P55285 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH6P55285 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDH6P55285 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH6P55285 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDH6P55285 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDH6P55285 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDH6P55285 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH6P55285 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.59■□□□□ 0.89
CDH6P55285 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDH6P55285 AL138781.1-201ENST00000566567 1274 ntBASIC20.59■□□□□ 0.89
CDH6P55285 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH6P55285 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH6P55285 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH6P55285 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH6P55285 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH6P55285 AP001271.2-201ENST00000624018 1556 ntBASIC20.59■□□□□ 0.89
CDH6P55285 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH6P55285 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CDH6P55285 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH6P55285 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH6P55285 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH6P55285 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH6P55285 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.58■□□□□ 0.89
CDH6P55285 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.58■□□□□ 0.89
CDH6P55285 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH6P55285 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH6P55285 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.58■□□□□ 0.89
CDH6P55285 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.58■□□□□ 0.89
CDH6P55285 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.58■□□□□ 0.89
CDH6P55285 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH6P55285 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH6P55285 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH6P55285 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH6P55285 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.58■□□□□ 0.88
CDH6P55285 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.58■□□□□ 0.88
CDH6P55285 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CDH6P55285 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
CDH6P55285 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH6P55285 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CDH6P55285 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH6P55285 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH6P55285 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH6P55285 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH6P55285 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CDH6P55285 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH6P55285 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH6P55285 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CDH6P55285 ID1-201ENST00000376105 1233 ntBASIC20.57■□□□□ 0.88
CDH6P55285 AL390719.1-204ENST00000412397 1219 ntBASIC20.57■□□□□ 0.88
CDH6P55285 HLA-L-209ENST00000420110 1011 ntBASIC20.57■□□□□ 0.88
CDH6P55285 AC097658.1-201ENST00000475555 843 ntBASIC20.57■□□□□ 0.88
CDH6P55285 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.57■□□□□ 0.88
CDH6P55285 AC098934.4-201ENST00000564127 592 ntBASIC20.57■□□□□ 0.88
CDH6P55285 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH6P55285 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.57■□□□□ 0.88
CDH6P55285 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH6P55285 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CDH6P55285 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CDH6P55285 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH6P55285 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH6P55285 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH6P55285 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDH6P55285 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH6P55285 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH6P55285 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDH6P55285 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH6P55285 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH6P55285 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 AC073210.2-201ENST00000430369 194 ntBASIC20.56■□□□□ 0.88
CDH6P55285 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH6P55285 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH6P55285 AC142086.2-201ENST00000569753 217 ntBASIC20.56■□□□□ 0.88
CDH6P55285 AC005829.2-201ENST00000571422 1056 ntBASIC20.56■□□□□ 0.88
CDH6P55285 MYC-209ENST00000641252 345 ntBASIC20.56■□□□□ 0.88
CDH6P55285 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.56■□□□□ 0.88
CDH6P55285 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CDH6P55285 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.56■□□□□ 0.88
CDH6P55285 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDH6P55285 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms